NCBI Bibliography

https://www.ncbi.nlm.nih.gov/myncbi/ariel.pani.1/bibliography/public/

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Gibney TV, Pani AM. Engineering the C. elegans genome with a nested, self-excising selection cassette. bioRxiv 2025.05.01.651742; doi.org/10.1101/2025.05.01.651742

 

Gibney TV, Mardick JI, Rasmussen NR, Latifi L, Sundaram MV, Reiner DJ, Pani AM. FGF-dependent, polarized SOS activity orchestrates directed migration of C. elegans muscle progenitors independent of canonical effectors in vivo. bioRxiv 2025.04.11.648432; doi.org/10.1101/2025.04.11.648432

 

Zimyanin V, Magaj M, Manzi NI, Yu C-H, Gibney T, Basaran M, Horton X, Pani AM, Needleman D, Dickinson DJ, Redemann S. Chromokinesin Klp-19 regulates microtubule overlap and dynamics during anaphase in C. elegans.  bioRxiv 2023.10.26.564275; doi.org/10.1101/2023.10.26.564275

 

Gibney TV, Pani AM (2025) FGF diffusion is required for the directed migration of postembryonic muscle progenitors in C. elegans. Development, dev.204802. doi: 10.1242/dev.204802

 

Pani AM (2024) Organogenesis: how active forces maintain integrity of migrating cells under pressure, Current Biology, 34(14):R693-R696, PMID: 39043144

 

Medwig-Kinney TN, Kinney BA, Martinez MAQ, Yee C, Sirota SS, Mullarkey AA, Somineni N, Hippler J, Zhang W, Shen K, Hammell CM, Pani AM, Matus DQ (2023) Dynamic compartmentalization of the pro-invasive transcription factor NHR-67 reveals a role for Groucho in regulating a proliferative-invasive cellular switch in C. elegans, eLife, 12:RP84355; doi: https://doi.org/10.7554/eLife.84355.3, PMID: 38038410

 

Andrade-Lopez JM, Pani AM, Wu M, Gerhart J, Lowe CJ (2023) Molecular characterization of nervous system organization in the hemichordate Saccoglossus kowalevskii. PLoS Biology, 21(9):e3002242, PMID: 37725784  

 

Pani AM†, Favichia M, Goldstein B (2023) Long-distance Wnt transport in axons highlights cell type-specific modes of Wnt transport in vivo. bioRxiv 2023.05.03.539245; doi: https://doi.org/10.1101/2023.05.03.539245, PMID: 37205471

 

Gibney TV, Favichia M, Latifi L, Medwig-Kinney TN, Matus DQ, McIntyre DC, Arrigo AB, Branham KR, Bubrig LT, Ghaddar A, Jiranek JA, Liu KE, Marcucci CG, Porter RJ, Pani AM (2023) A simple method to dramatically increase C. elegans germline microinjection efficiency. Developmental Biology, Jul 9;S0012-1606(23)00129-X. doi: 10.1016/j.ydbio.2023.07.003, PMID: 37433390

 

Costa DS, Kenny-Ganzert IW, Chi Q, Kelley LC, Park K, Garde A, Matus DQ, Park S, Yogev S, Goldstein B, Gibney TV, Pani AM, Sherwood DR (2023) C. elegans anchor cell transcriptome: ribosome biogenesis and endomembrane expansion promote cell invasion. Development 150, dev201570, PMID: 37039075

 

Kippenhan JS, Gregory MD, Nash T, Kohn P, Mervis CB, Eisenberg DP, Garvey MH, Roe K, Morris CA, Kolachana B, Pani AM, Sorcher L, Berman KF. (2023) Dorsal visual stream and LIMK1: hemideletion, haplotype, and enduring effects in children with Williams syndrome. Journal of Neurodevelopmental Disorders, 15(1):29, PMID: 3763390

 

Pani AM, Gibney TV, Medwig-Kinney TN, Matus DQ, Goldstein B (2022) A new toolkit to visualize and perturb endogenous LIN-12/Notch signaling in C. elegans. microPublication Biology, 10.17912/micropub.biology.000603, PMID: 35966394

 

Medwig-Kinney TN, Sirota SS, Gibney TV, Pani AM†, Matus DQ (2022) An in vivo toolkit to visualize endogenous LAG-2/Delta and LIN-12/Notch signaling in C. elegans. microPublication Biology, 10.17912/micropub.biology.000602, PMID: 35966395

 

Favichia M, Gibney T, Kowalevski K, Pani A, Deppmann D (2022) Salt, Fat, Acid, Heat: Modulators of signal transduction. In eLS, John Wiley & Sons, Ltd (Ed.), https://doi.org/10.1002/9780470015902.a0029385

 

Lantzsch I, Yu CH, Yazdkhasti H, Lindow N, Szentgyorgyi E, Prohaska S, Pani AM, Srayko M, Furthauer S, Redemann S (2021) Microtubule reorganization during female meiosis in C. elegans. eLife, 10:e58903, 10.7554/eLife.58903, PMID: 34114562

 

Adikes RC, Kohrman AQ, Martinez MAQ, Palmisano NJ, Smith JJ, Medwig-Kinney TN, Min M, Sallee MD, Ahmed OB, Kim N, Liu S, Morabito RD, Weeks N, Zhao Q, Zhang W, Feldman JL, Barkoulas M, Pani AM, Spencer SL, Martin BL, Matus DQ (2020) Visualizing the metazoan proliferation-quiescence decision in vivo. eLife, 9:e63265, 10.7554/eLife.63265, PMID: 33350383

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Gordon KL*, Payne SG*, Linden-High LM*, Pani AM, Goldstein B, Hubbard JA, Sherwood DR (2019) Ectopic germ cells can induce niche-like enwrapment by body wall muscle. Current Biology 29: 828-833.e5

 

Pani AM, Goldstein B (2018) Direct visualization of a native Wnt in vivoreveals that a long-range Wnt gradient forms by extracellular dispersal. eLife 7:e38325 DOI: 10.7554/eLife.38325 (recommended by F1000)

 

Heppert JK, Pani AM, Roberts AM, Dickinson DJ, Goldstein B (2018) A CRISPR tagging-based screen reveals localized players in Wnt-directed asymmetric cell division. Genetics 208: 1147-1164 (cover image)

            

Darras S, Fritzenwanker J, Uhlinger K, Farrelly E, Pani AM, Hurley I, Norris R, Osowitz M, Terasaki M, Wu M, Aronowicz J, Kirschner M, Gerhart J, Lowe CJ (2018) Anteroposterior patterning by early canonical Wnt signaling during hemichordate development. PLoS Biology 16: e2003698

 

Naegeli KM, Hastie E, Garde A, Wang Z, Keeley DP, Gordon KL, Pani AM, Kelley LC, Morrissey M, Chi Q, Goldstein B, Sherwood DR (2017) Cell invasion in vivo via rapid exocytosis of a transient lysosome-derived membrane domain. Developmental Cell 43: 403-417

 

Highlighted by – Wang S, Yamada KM (2017) Localized lysosome exocytosis helps breach tissue barriers. Developmental Cell 43: 377-378

 

Linden LM, Gordon KL, Pani AM, Payne SG, Garde A, Burkholder D, Chi Q, Goldstein B, Sherwood DR (2017) Identification of regulators of germ stem cell enwrapment by its niche in C. elegans. Developmental Biology 429: 271-284.

 

Heppert JK, Dickinson DJ, Pani AM, Higgins CD, Steward A, Ahringer J, Kuhn JR, Goldstein B (2016) Comparative assessment of fluorescent proteins for in vivoimaging in an animal model system. Molecular Biology of the Cell 27: 3385-3394.

 

Marston DJ*, Higgins CD*, Peters KA, Cupp TD, Dickinson DJ, Pani AM, Moore RP, Cox AH, Kiehart DP, Goldstein B (2016) MRCK-1 drives apical constriction in C. elegansby linking developmental patterning to force generation. Current Biology 26: 2079-2089.

 

Yao Y, Minor PJ, Zhao YT, Jeong Y, Pani AM, King AN, Symmons O, Gan L, Cardoso WV, Spitz F, Lowe CJ, Epstein DJ (2016) Cis-regulatory architecture of a brain signaling center predates the origin of chordates. Nature Genetics 48: 575-580.

 

Simakov O, Kawashima T, Marletaz F, Jenkins J, Koyanagi R, et. al. 23 of 52 authors (2015) Hemichordate genomes and deuterostome origins. Nature 527: 459-465.

 

     Highlighted by – Dunn CW (2015) Genomics: Acorn worms in a nutshell. Nature 527: 448-449

 

Dickinson DJ, Pani AM, Heppert J, Higgins CD, Goldstein B (2015) Streamlined genome engineering with a self-excising drug selection cassette. Genetics 200: 1035-1049. (original and SapTrap based plasmids at Addgene) (C. elegans genome engineering protocols)

 

Pani AM, Mullarkey E*, Aronowicz J*, Assimacopoulos S, Grove EA, Lowe CJ (2012) Ancient deuterostome origins of vertebrate brain signalling centres. Nature 483: 289-294. 

 

     Highlighted by – Gee H (2012) Developmental biology: a brainy background. Nature 483: 280.

 

Lowe CJ, Pani AM (2011) Animal evolution: a soap opera of unremarkable worms. Current Biology 21: 151-153

 

Sobreira TJP, Marlétaz F, Simões-Costa M, Schechtman D, Pereira AC, Brunet F, Sweeney S, Pani A, Aronowicz J, Lowe CJ, Davidson B, Laudet V, Bronner M, de Oliveira PSL, Schubert M, Xavier-Neto J (2010) Structural shifts of aldehyde dehydrogenase enzymes were instrumental for the early evolution of retinoid-dependent axial patterning in metazoans. Proc Natl Acad Sci USA 108: 226-231.

 

Pani AM, Hobart HH, Morris CA, Mervis CB, Bray-Ward P, Kimberley KW, Rios CM, Clark RC, Gulbronson MD, Gowans GC, Gregg RG (2010) Genome rearrangements detected by SNP microarrays in individuals with intellectual disability referred with possible Williams syndrome. PLoS One 5: e12349.

 

Morris CA, Pani AM, Mervis CB, Rios CM, Kistler DJ, Gregg RG. (2010) Alpha-1-Antitrypsin deficiency alleles are associated with joint dislocation and scoliosis in Williams syndrome. American Journal of Medical Genetics Part C Seminars in Medical Genetics 154C; 299-306.

 

Hobart HH, Morris CA, Mervis CB, Pani AM, Kistler DJ, Rios CM, Kimberley KW, Gregg RG, Bray-Ward P (2010) Inversion of the Williams syndrome region is a common polymorphism found more frequently in parents of children with Williams syndrome. American Journal of Medical Genetics Part C Seminars in Medical Genetics 154C: 220-228.

 

Marshall C*, Young E*, Pani AM, Morris C, Freckmann M-L, Lacassie Y, Howard C, Fitzgerald KK, Peippo M, Morris CA, Shane K, Priolo M, Morimoto M, Kondo I, Manquoqlu E, Berker-Karauzum S, Edery P, Hobart HH, Mervis CB, Zuffardi O, Reymond A, Kaplan P, Tassabehji M, Gregg RG, Scherer SW, Osborne LR. (2008) Infantile spasms is associated with deletion of the MAGI2 gene on chromosome 7q11.23-q21.11. American Journal of Human Genetics 83: 106-111.

 

* equal contributions

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